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Lyve-SET

Lyve-SET is a tool that compares the genetic code of different bacteria to see how closely related they are.

  • Tools & Utilities
Lyve-SET is a tool that compares the genetic code of different bacteria to see how closely related they are. By identifying tiny differences in their DNA, it helps scientists track the spread of diseases and create a "family tree" to find the source of an outbreak.

Platform availability

Available on 0 of 9 platforms

  • Unraid (not listed)
  • TrueNAS (not listed)
  • Umbrel (not listed)
  • ZimaOS (not listed)
  • Proxmox (not listed)
  • Helm (not listed)
  • Mac (not listed)
  • Windows (not listed)
  • Linux (not listed)

Health score

Not enough data yet for a health score. It needs at least 2 of 4 factors: maintenance, popularity, ease of install, resource needs.

No GitHub repository data collected yet.

Resources & Compatibility

ARM (e.g. Raspberry Pi) is not supported.

Checked 12 days ago - source: Docker Hub image tags and published docs

First-install notes

  • Installation lyve-SET can be installed via Docker (staphb/lyveset image) or Singularity/Apptainer. See INSTALL.md in the GitHub repository for build steps. source

Fetched today - each note links to its source

Alternatives (2)

Checked 12 days ago - source: AlternativeTo

Common questions

Does LYVE-SET use high-quality SNPs for its phylogeny?

Yes, it is a method of using hqSNPs to create a phylogeny.

Is LYVE-SET focused on outbreak investigations?

It is described as especially for outbreak investigations.

Where is the LYVE-SET FAQ located?

It is available in the repository docs folder as FAQ.md.

Answers sourced from github.com, github.com

Community

Collected 6 days ago - public community threads