Pathway Commons App UI
App UI is a web interface for searching, visualising, and analysing biological interaction data in Pathway Commons, a large library of genes and proteins, for…
Platform availability
Available on 0 of 9 platforms
- Unraid (not listed)
- TrueNAS (not listed)
- Umbrel (not listed)
- ZimaOS (not listed)
- Proxmox (not listed)
- Helm (not listed)
- Mac (not listed)
- Windows (not listed)
- Linux (not listed)
Health score?A 0-100 score computed nightly from four factors: maintained (40%: recent commits and steady activity), popular (25%: GitHub stars, log scale), easy to install (20%: platforms, install notes, setup guides, Docker image) and light to run (15%: minimum RAM, ARM support). When the source code has been checked, a fifth factor, security check (20%: automated scan for committed secrets, unsafe desktop-app settings, known-vulnerable dependencies and project hygiene; any serious finding caps it at 20), is added. Factors without data are left out and the rest are rescaled.
9/100 Low
- Maintained
- 0last commit 1917 days ago
- Popular
- 2414 GitHub stars
- Easy to install
- 100 install platforms, Docker image
- Light to run
- No data
Based on 3 of 4 factors.
- GitHub stars
- 14
- Open issues
- 14
- Last commit
- 2021-07-14
- License
- EPL-1.0
- Activity
- stale
Checked 9 days ago - source: GitHub (PathwayCommons/chibe)
Resources & Compatibility
ARM (e.g. Raspberry Pi) is not supported.
Checked 15 days ago - source: Docker Hub image tags and published docs
First-install notes
- Install with Docker App UI is published as the pathwaycommons/app-ui Docker image. Start a container with Docker to run it, then open the web interface in your browser. source
Fetched today - each note links to its source
Variants
Alternatives
No alternatives collected yet.
Common questions
What data formats can I download for backup or analysis?
The data can be downloaded per datasource in BioPAX, Simple Interaction Format, and Gene Set Database formats.
How can I query the interaction data programmatically?
BioPAX Web Services provide search, get, graph, and traverse operations, while SIF Web Services support fast graph-theoretical queries.
Can I work with the data in Cytoscape?
CyPath2 is a Cytoscape app that lets you search and retrieve pathways from the data with filtering and graph queries.
Where can I find step-by-step workflow guidance?
A training guide is provided as a pathway analysis online textbook with workflows and primers for concepts.
Answers sourced from www.pathwaycommons.org
Community
- App UI (unity's ui toolkit framework) - Unity Discussions (forum)
- Apple Developer Forums (forum)
- Top 25 UI/UX Forums in 2026 (forum)
- Are there any ui/ux designers in selfhosted that have advice ... - Reddit (reddit)
Collected 9 days ago - public community threads